2.1 Plant materials
Plant material was collected from eastern Sudan, Erkowit region, in January/2015. Botanical identification and authentication were performed and voucher specimens (No. 2014/UG) have been deposited in Botany Department Herbarium, Faculty of Science, University of Khartoum, Sudan.
2.2 Extract preparation
The bulbs of Ureginea grandiflora were cut into small slices, air dried and grinded to powder. 40 g of plant material was macerated in ratio of organic solvents (chloroform: methanol) (1:1, v/v) (200 mL), at room temperature for 72 h. The filtrate was collected and concentrated at 45ºC under vacuum by rotary evaporator (Buchi, USA) and further dried overnight at 45ºC to obtain (6.952g). Stock solution of the extract was prepared at 10 mg/mL in 100% dimethyl sulfoxide (DMSO). The stock solution as well as DMSO (vehicle) was diluted with cell culture medium, so the highest DMSO concentration exposed to the cells was 0.1 % v/v.
2.3 Preliminary phytochemical screening
The extract was subjected to phytochemical analysis for the detection of terpenoids, alkaloids, saponins (Harborne Jb, 1984), tannins, flavonoids (Sofowora A, 1993), cardiac glycoside and anthraquinones (Trease and Evans, 1989) using standard phytochemical methods.
2.4 Cell viability assay
2.4.1 Cell lines and cell culture
Human Endothelial Cell line (EA.hy 926) purchased from ScienCell, USA. Human colorectal carcinoma cell line (HCT-116), human hormone sensitive and invasive breast cancer line (MCF-7) and human hormone resistant breast cancer cell line (MDA-MB 231) were purchase from ACCT, USA. All cells maintained in an incubator (Binder, Germany) with temperature 37ºC, 5% CO2 and humidity. EA.hy 926, MDA-MB 231 and MCF-7 were propagated in DMEM (Dulbecco’s Modified Eagle Medium, Sigma, Germany) supplemented with 10% FBS (Foetal Bovine Serum, Sigma, Germany) and 1% PS (Penicillin/ Streptomycin, Sigma, Germany). HCT-116 was propagated in RPMI-1640 (Sigma, Germany) supplemented with 10% FBS, and 1% PS. Cell culture work was done in sterile conditions using Class II biosafety cabinet (ESCO, USA).
2.4.2 Cell proliferation assay
The MTT (3-(4,5-dimethylthiazol-2-yl)-2,5-diphenyl tetrazolium bromid) cytotoxicity assay was carried out according to the method described by (Mosmann, 1983) with minor modifications. Cells were seeded at 1.5x104 cells in each well of 96-well plate in 100µL of fresh culture medium and were allowed to attach for overnight. The stock solutions of extracts were diluted in cell culture medium to obtain 100µg/mL and 100µL was added to each well. After 48 h of treatment the medium was aspirated and the cells were exposed to MTT solution prepared at 5mg /mL in sterile PBS added to each well at 10% v/v in respective medium and was incubated at 37°C in 5% CO2 for 3 h. The water insoluble formazan salts was solubilized with 200µL DSMO/well. Absorbance was measured by Magellan – Microplate Reader Software TECAN Group Ltd., Switzerland) at primary wave length of 570 nm and reference wavelength of 620 nm. Each plate contained the samples, negative control and blank. DMSO at less than 1% v/v was used as a negative control. Similarly, tamoxifen with serial concentrations is used as standard reference drug.
2.5 Determination of changes in mitochondrial membrane potential
The changes in mitochondrial membrane potential was detected by Rhodamine 123 staining (Johnson et al., 1980; O'Connor et al., 1988). Briefly, MCF-7 cells (0.5 × 106 cells/mL) were cultured in 24-well plates. After cell attachment, the cells were exposed to new medium with extract (10 and 20µg/mL) or with vehicle (0.1% DMSO). The cells were washed twice with PBS, ?xed with 4% paraformaldehyde for 30 minutes, washed with PBS, and stained for 30 minutes with Hoechst 33258 stain at 10µg/mL and Rhodamine 123 at 5µg/mL simultaneously. The cells were washed twice and observed under the EVOS f1 fluorescent digital microscope (Advanced Microscopy Group, USA). The loss of mitochondrial membrane potential was indicated by the loss of fluorescent intensity in the cells. The images were acquired after 6, and 12 hours. The apoptotic cells were counted in four randomLy selected ?elds per well. The apoptotic index was calculated as the percentage of apoptotic cells compared to the total number of cells.
2.6 Determination of nuclear condensation by Hoechst 33342 stain
The effect of U. grandiflora extract on nuclear fragmentation of MCF-7 was detected by fluorescence microscopy using Hoechst 33258 stain (Oberhammer et al., 1994: Zhang and Xu 2000). Cells were treated with extract (10 and 20µg/mL) and analyzed separately at two different time intervals (12 and 24 hours). 5-furoracel (10µg/mL) used as the positive and 0.1% DMSO as a negative control. The cells were fixed in 4% paraformaldehyde for 30 minutes before staining with Hoechst 33342 stain and incubated for 30 minutes. Nuclear condensation and fragmentation were examined under a fluorescence microscope. Cells with intensely colored, crescent shape, condensed, or fragmented nuclei were considered to be apoptotic. The number of cells with apoptotic morphology was counted in ten randomly selected fields per well. The cells were photographed at 20 × magnifications using an EVOS fluorescent digital microscope (Advanced Microscopy Group, Bothell, USA). The apoptotic index was calculated as the ratio of apoptotic cells to the total number of cells.
2.7 Clonogenicity assay
Effect on clonogenicity of MCF-7 cells evaluated by the colony formation assay as previously described by Franken et al (2006). Briefly, cells were harvested and resuspended in fresh DMEM culture medium at density 500 cell/ mL then cells were seeded in 6-well plate at 2 mL/well and incubated at 37ºC and humidified 5% CO2 for 24 hr. The old media was removed and cells were treated with different concentrations of the extract 2.5,5, 10 and 20 µg/mL in fresh medium. None treated cells were served as negative control and Tamoxifen as positive control. After 48 hr, the medium containing the treatment sample was removed and the cells were washed twice with PBS and a fresh medium was added. Then the cells were incubated for 5 days to allow colonies to form. At the end of incubation, the colonies were fixed in 4% paraformaldehyde for 30 min and stained with 0.25% crystal violet, the colonies were washed to remove the free excess stain and the number of colonies of more than 50 cells was counted using AMG EVOS florescence inverted microscope (4x10 magnification).
The plating efficiency (PE) of untreated cells was determined as follow:
PE = (the number of colonies formed / the numberof cells seeded) x 100%.
The survival fraction (SF) of treated cells was calculated using the formula:
SF= ((number of colonies formed after treatment)/ (number of seeded cells x PE)) X 100%
2.8 Migration assay
The assay was carried out as described previously Liang et al. (2007). In brief, MCF-7 were seeded in 6 well plates till the formation of a confluent monolayer after which a wound was created using 200 µL micropipette tip. The detached cells were removed by washing with PBS and the plates were treated with U. grandiflora extract (10µg/ml). The wounds were photo-graphed after 12 and 18 h, and the width of the cell-free wounds was measured using an inverted light microscope supplied with Leica Quin computerized imaging system. Five fields per well were photographed and minimum of 15 readings per field were taken. The results are presented as mean percentage of migration inhibition compared to control.
2.9 Invasion assay
The assay carried out by a miner modification of the Boyden chamber assay using matrigel (Shaw et al., 2006; Baharetha, 2012). Matrigel was used as an artificial basement membrane matrix, this assay is more rigoroustest and it mimics the behaviour of transmigration of cells in vivo. Briefly, 50µL of (1:1 thawed matrigel (10 mg/mL in DMEM medium) was spread into 96-well plate and allowed to solidify by incubation at 37°C in 5% CO2 for 45min. Then MCF-7 cell line were suspended in DMEM medium and immediately seeded at 5×103 cells/well (150 µL/ well). Some of the cells were seeded in DMEM and DMSO only (1%) and used as a negative control, other wells were seeded with DMEM containing the extract (5,10 and 20 µg/mL), then re-incubated in the humidified incubator at 37ºC and 5% CO2 for further 24 hours. Subsequently, the cell culture medium was aspirated carefully to remove the floating and dead cells. After a single wash with PBS the wells were captured using an AMG EVOS florescence inverted microscope (4xmagnification). Quantification of invasion was assessed by counting the number of the invaded cells in the treated wells with comparison to that of the negative control. The number of invading cells was determined, and results are presented as a percentage inhibition relative to the untreated cells. The calculations done as below:
% of inhibition of invasion = (1-(No. of invaded cells(T) /No. of invaded cells (–ve control))) × 100
Where, T: Treated wells with extract.
2.10 Statistical analysis
Each assay was repeated thrice independently with six replicate each. The results were presented as the mean ± standard error of mean (SEM). Fifty percent inhibitory concentration (IC50) values were calculated from concentration-dependent curves using regression analysis in Microsoft Excel 2013. The statistical significance of difference was evaluated by analysis of variance (ANOVA), followed by Tukey’s post hoc test. A P-value of less than 0.05 was considered significant.